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In Computers in biology and medicine

Melanoma is a deadly malignant skin cancer that generally grows and spreads rapidly. Early detection of melanoma can improve the prognosis of a patient. However, large-scale screening for melanoma is arduous due to human error and the unavailability of trained experts. Accurate automatic melanoma classification from dermoscopy images can help mitigate such issues. However, the classification task is challenging due to class-imbalance, high inter-class, and low intra-class similarity problems. It results in poor sensitivity scores when it comes to the disease classification task. The work proposes a novel knowledge-distilled lightweight Deep-CNN-based framework for melanoma classification to tackle the high inter-class and low intra-class similarity problems. To handle the high class-imbalance problem, the work proposes using Cost-Sensitive Learning with Focal Loss, to achieve better sensitivity scores. As a pre-processing step, an in-painting algorithm is used to remove artifacts from dermoscopy images. New CutOut variants, namely, Sprinkled and microscopic Cutout augmentations, have been employed as regularizers to avoid over-fitting. The robustness of the model has been studied through stratified K-fold cross-validation. Ablation studies with test time augmentation (TTA) and the addition of various noises like salt & pepper, pepper-only, and Gaussian noises have been studied. All the models trained in the work have been evaluated on the SIIM-ISIC Melanoma Classification Challenge - ISIC-2020 dataset. With our EfficientNet-B5 (FL) teacher model, the EfficientNet-B2 student model achieved an Area under the Curve (AUC) of 0.9295, and a sensitivity of 0.8087 on the ISIC-2020 test data. The sensitivity value of 0.8087 for melanoma classification is the current state-of-the-art result in the literature for the ISIC-2020 dataset which is a significant 49.48% increase from the best non-distilled standalone model, EfficientNet B5 (FL) teacher with 0.5410.

Adepu Anil Kumar, Sahayam Subin, Jayaraman Umarani, Arramraju Rashmika

2023-Jan-24

Cost-Sensitive Learning, Deep Learning, EfficientNet, ISIC-2020 dataset, In-painting, Stratified K-fold Cross Validation, Teacher Student Model